The donkified flop bet is great, makes the hand play face up. Problem is, I have fewer outs because they're in my hand.

Poker Stars
Pot Limit Omaha Ring game
Blinds: $0.25/$0.50
9 players
Converter

Stack sizes:
UTG: $30.80
UTG+1: $29.95
MP1: $29.45
MP2: $42.80
MP3: $26.60
Hero: $55.90
Button: $43.75
SB: $42.85
BB: $49.50

Pre-flop: (9 players) Hero is CO with Q T A Q
2 folds, MP1 calls, MP2 folds, MP3 calls, Hero raises to $2.5, Button folds, SB calls, BB folds, MP1 calls, MP3 calls.

Flop: Q A T ($10.5, 4 players)
SB checks, MP1 bets $1, MP3 calls, Hero calls, SB calls.

Turn: 3 ($14.5, 4 players)
SB checks, MP1 bets $13.8, MP3 folds, Hero ????

why would you do anything but call there?

Even though i'm getting decent at omaha, hands like this where i know i'm behind but have multiple ways to win, i don't know, calling just feels weak/lame. Passive. Of course, folding is even weaker. I don't know, I can't explain it.

Though I can't bluff someone off a made hand, it just feels weird to call here. Of course, folding naked nut flush draw here is standard. Do you call here with just nut fd and top two or nutdraw and any two pair, particularly with somebody behind me (let's say on the button instead of a likely folding SB)?

You can't just call here.

MP1 has 12$ left , put him all in.

I'd just call if he had a deeper stack